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(covers information from several alternate timelines)
In 2368, Data determined that the carbon dioxide in a soft drink he was having with Timothy reacted with the polysaccharides therein to produce "an unusual combination of texture and effervescence." (TNG: "Hero Worship")
Three subterranean pockets of carbon dioxide were located on Penthara IV. When the planet was struck by a type C asteroid and was threatened to freeze over because of a large cloud cover, the USS Enterprise-D phaser drilled large holes into the pockets in order to release the gas, thereby creating a greenhouse effect and preventing the world from freezing over. (TNG: "A Matter of Time")
The alien lifeform, later discovered to be Odo infected with volcanic gas, was determined to require a higher concentration of carbon dioxide than Deep Space 9's atmosphere provided. (DS9: "The Alternate")